Distributed Computing Blast Implementation

Genomic selection (GS) accelerates achieving genetic gain through shorter breeding cycles and is an alternative to marker-assisted selection. Genetwister implements new breeding schemes and methods that integrate GS for crop improvement.

With increasing sample numbers and marker panel sizes, it is valuable to increase the throughput of sequencing and genotyping procedures. Genetwister develops cost-effective methods and applies available methods for allowing high-throughput genomics.

At Genetwister, tools are developed using distributed computing models and technologies like Spark and Hadoop.

Genetwister investigates new precision phenotyping methods to integrate phenotypic data into genetic models to support breeding

CROPaware – A web based software platform for breeding and genomics data management.

High-quality reference genome assemblies improve Genomic Selection and breeding

Tailored marker selection allowing for genotyping regardless of species, genome size and ploidy level.

Using state-of-the-art long read sequencing technologies, Genetwister builds high quality genome assemblies of novel species and obtains long-range genomic information such as haplotypes and structural variants.

Acceleration and cost reduction in plant breeding with improved genotype/phenotype relations, utilizing linked variants.

To interconnect different knowledge domains, we use different semantic web technologies.